|
Molecular analysis for sodA among sarcoidosis and control specimens |
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| Patient |
Age, Sex, Racea |
Biopsy site |
Pathologic diagnosis |
Presence of granuloma |
Tissue storageb |
PCR analysisc |
sodA region(s) |
|
|
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| Sarcoid 1 |
31, M, C |
Lung |
Sarcoidosis |
Yes |
Frozen |
Mtb complex |
4, 5 |
| Sarcoid 2 |
46, F, C |
Lymph node |
Sarcoidosis |
Yes |
Frozen |
GDM |
4 |
| Sarcoid 3 |
65, M, U |
Lymph node |
Sarcoidosis |
Yes |
Frozen |
Mtb complex |
2, 4 |
| Sarcoid 4 |
29, F, C |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
- |
- |
| Sarcoid 5 |
36, F, AA |
Lung |
Sarcoidosis |
Yes |
Frozen |
Mtb complex |
4 |
| Sarcoid 6 |
48, F, AA |
Skin |
Sarcoidosis |
Yes |
FFPE |
Mtb complex |
3 |
| Sarcoid 7 |
30, M, AA |
Skin |
Sarcoidosis |
Yes |
Frozen |
Mtb complex |
5 |
| Sarcoid 8 |
33, F, C |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
Mtb complex |
4 |
| Sarcoid 9 |
50, F, AA |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
- |
- |
| Sarcoid 10 |
50, M, C |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
Mtb complex |
5 |
| Sarcoid 11 |
41, F, C |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
- |
- |
| Sarcoid 12 |
39, M, C |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
- |
- |
| Sarcoid 13 |
46, M, AA |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
Mtb complex |
5 |
| Sarcoid 14 |
45, M, C |
Skin |
Sarcoidosis |
Yes |
FFPE |
Mtb complex |
2 |
| Sarcoid 15 |
34, F, C |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
GDM |
4 |
| Sarcoid 16 |
28, M, C |
Lymph node |
Sarcoidosis |
Yes |
Frozen |
- |
- |
| Sarcoid 17 |
34, M, C |
Lymph node |
Sarcoidosis |
Yes |
FFPE |
Mtb complex |
2 |
| Control 1 |
70, F, C |
Colon |
Normal colon |
No |
Frozen |
- |
- |
| Control 2 |
22, F, C |
Lymph node |
Histoplasmosis |
Yes |
Frozen |
Mtb complex |
4, 5 |
| Control 3 |
60, M, C |
Lymph node |
Nocardia |
Yes |
Frozen |
- |
- |
| Control 4 |
56, F, C |
Lymph node |
Cholangial carcinoma |
No |
Frozen |
- |
- |
| Control 5 |
49, M, C |
Lymph node |
Nonspecific Interstitial Pneumonia |
No |
Frozen |
- |
- |
| Control 6 |
11, F, AA |
Skin |
Blastomycosis |
Yes |
FFPE |
- |
- |
| Control 7 |
51, F, C |
Lung |
Histoplasmosis |
Yes |
FFPE |
- |
- |
| Control 8 |
26, M, C |
Lung |
Histoplasmosis |
Yes |
FFPE |
- |
- |
| Control 9 |
30, M, C |
Lung |
Blastomycosis |
Yes |
FFPE |
- |
- |
| Control 10 |
25, M, C |
Skin |
Blastomycosis |
Yes |
FFPE |
- |
- |
| Control 11 |
26, M, C |
Skin |
Blastomycosis |
Yes |
FFPE |
- |
- |
| Control 12 |
36, M, U |
Lung |
Hodgkin's lymphoma |
No |
Frozen |
- |
- |
| Control 13 |
15, M, U |
Lymph node |
Hodgkin's lymphoma |
No |
Frozen |
- |
- |
| Control 14 |
68, M, C |
Lymph node |
Sinus histiocytosis |
No |
Frozen |
- |
- |
| Control 15 |
47, F, C |
Lymph node |
Histoplasmosis |
Yes |
FFPE |
- |
- |
| Control 16 |
35, F, C |
Lung |
Cryptococcus |
Yes |
FFPE |
Mtb complex |
4 |
| TB 1 |
30, M, C |
Lymph node |
Tuberculosis |
Yes |
FFPE |
Mtb complex |
3, 5 |
| TB 2 |
46, M, C |
Knee |
Tuberculosis |
Yes |
FFPE |
Mtb complex |
2, 4, 5 |
| TB 3 |
36, M, H |
Lymph node |
Tuberculosis/AIDS |
Yes |
FFPE |
Mtb complex |
1 – 6 |
|
aC-Caucasian, AA-African American, H-Hispanic, U-Unknown; bFFPE – formalin-fixed, paraffin-embedded cGDM – genetically distinct mycobacteria | |||||||
Allen et al. Respiratory Research 2008 9:36 doi:10.1186/1465-9921-9-36 |
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