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Sequences of primers used to amplify sodAa |
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| Name |
Primer sequence |
Amplicon length (bp) |
Nucleotide (ORF)/amino acid position |
|
|
|
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| Region 1 |
Fb |
5' CCGTGGCCGAATACACCTT 3' |
127 |
-167 |
| R |
5' CATTGGCGCCCTTTACGTA 3' |
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| Region 2 |
F |
5' GAGCTTCACCACAGCAAGCA 3' |
127 |
76–202/26–67 |
| R |
5' AAGCTAGATTCTTTTCGTTCAGCAA 3' |
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| Region 3 |
F |
5' CGTCGCCAAACTCGAAGAG 3' |
151 |
129–279/44–93 |
| R |
5' GCCGGTGGGCTTGTCA 3' |
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| Region 4 |
F |
5' GCCACGTCAATCACACCATCT 3' |
232 |
215–446/73–149 |
| R |
5' AAGTTCGTCTGGTGGTCGTAAAC 3' |
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| Region 5 |
F |
5' GGGACACACTCGGCAACAA 3' |
158 |
389–546/131–182 |
| R |
5' CAAAACGCCTTGGCAAAGTC 3' |
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| Region 6 |
F |
5' TTTACGACCACCAGACGAACTTC 3' |
161 |
425–585/150–195 |
| R |
5' CGCATACCGTGACTGCACAT 3' |
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|
aBased on M. tuberculosis H37Rv sodA sequence (GenBank no. AF061030) bF – forward, R – reverse | ||||
Allen et al. Respiratory Research 2008 9:36 doi:10.1186/1465-9921-9-36 |
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