Table 3

Sequences of the Oligonucleotides used in the EMSAs.

NF-κB consensus
5'-AGTTGAGGGGACTTTCCCAGGC-3'
22 bp

NF-CD38
5'-AGTATGGGGATTCCTCAAAGAT-3'
22 bp
AP-1 consensus
5'-CGCTTGATGACTCAGCCGGAA-3'
21 bp
AP1–1
5'-GGAACTCTGAGGCAAGGGGTT-3'
21 bp
AP1–2
5'-GCTTTTCTGCCTCAGAGTCTT-3'
21 bp
AP1–3
5'-CTAGCCTAACTACAATTGGCC-3'
21 bp
AP1–4
5'-ATCATCTTTGACTCATCTCTTTC-3'
21 bp
AP1–5
5'-CCTTCCTTTGGTCAGTTACAC-3'
21 bp
AP1–6
5'-CAATTCTTGAATCATGCCTCT-3'
21 bp
GRE consensus
5'-TAGAGGATCTGTACAGGATGTTCTAGAT-3'
28 bp
GRE1
5'-AATGTCACAGATGTTCTCTTAATAAAGA-3'
28 bp
GRE2
5'-TTCCGAACTTCTGTTCTGTTTCCCTCAA-3'
28 bp
GRE3
5'-AAGCACTGCCATGTTCTCACTTATAAGT-3'
28 bp
GRE4
5'-GCCATTGTAACTGTTCTCCATCCTTATC-3'
28 bp

* The putative binding sites for the different transcription factors in the proximal promoter region of cd38 are underlined and in bold font.

Tirumurugaan et al. Respiratory Research 2008 9:26   doi:10.1186/1465-9921-9-26